Don, you should realise that you should not use plastic tubes with graphite shafted golf clubs. Instead you should have a bag with dividers that are padded at the top. JLGolf's website does not state that these tubes will protect your clubs, just that they stop the grips and shafts getting tangled. American Golf do state that their similar product is not suitable for graphite shafts.
Chip marks on the paintwork is often caused by the heads of clubs catching the shafts of others when the bag is either being carried or going over rough ground when in a trolley bag, as mine have been although my bag has padded dividers, and when clubs are taken out or being returned to the bag. I believe that the paintwork on your club shafts is only cosmetic and any chips will not seriously damage their performance.
I doubt that you have any comeback on the seller just because you bought a product that wasn't correct for your actual needs.